发表时间
2026-01-26
学术发表
VenusX: Unlocking Fine-Grained Functional Understanding of Proteins
期刊
ICLR, 2026.
Fast and Interpretable Protein Substructure Alignment via Optimal Transport
发表时间
2026-01-26
期刊
ICLR 2026
Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models
发表时间
2025-09-19
期刊
NeurIPS, 2025
STAGE: A compact and versatile TnpB-based genome editing toolkit for Streptomyces
发表时间
2025-08-26
期刊
Proceedings of the National Academy of Sciences, 2025
From high-throughput evaluation to wet-lab studies: advancing mutation effect prediction with a retrieval-enhanced model
发表时间
2025-07-15
期刊
ISMB/ECCB, 2025.
Harnessing protein language model for structure-based discovery of highly efficient and robust PET hydrolases
发表时间
2025-07-05
期刊
Nature Communications, 2025
VenusFactory: An Integrated System for Protein Engineering with Data Retrieval and Language Model Fine-Tuning
发表时间
2025-07-01
期刊
ACL Demo, 2025.
A Deep Retrieval-Enhanced Meta-Learning Framework for Enzyme Optimum pH Prediction
发表时间
2025-03-24
期刊
J. Chem. Inf. Model, 2025,
VenusMutHub: A systematic evaluation of protein mutation effect predictors on small-scale experimental data
发表时间
2025-03-14
期刊
Acta Pharmaceutica Sinica B, 2025
Entropy-driven zero-shot deep learning model selection for viral proteins
发表时间
2025-02-28
期刊
Physical Review Research, 2025,
AI-enabled Alkaline-resistant Evolution of Protein to Apply in Mass Production
发表时间
2025-02-19
期刊
Elife, 2025,
Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection
发表时间
2025-01-23
期刊
ICLR, 2025.
PROTSOLM: Protein Solubility Prediction with Multi-modal Features
发表时间
2025-01-10
期刊
IEEE BIBM, 2024.
Secondary Structure-Guided Novel Protein Sequence Generation with Latent Graph Diffusion
发表时间
2025-01-10
期刊
IEEE BIBM, 2024.
Protein Representation Learning with Sequence Information Embedding: Does it Always Lead to a Better Performance?
发表时间
2025-01-10
期刊
IEEE BIBM, 2024.
A conditional protein diffusion model generates artificial programmable endonuclease sequences with enhanced activity
发表时间
2024-09-10
期刊
Cell Discovery, 2024
Simple, Efficient, and Scalable Structure-Aware Adapter Boosts Protein Language Models
发表时间
2024-08-07
期刊
J. Chem. Inf. Model, 2024,
PETA: evaluating the impact of protein transfer learning with sub-word tokenization on downstream applications
发表时间
2024-08-02
期刊
Journal of Cheminformatics, 16, 92 (2024).
Enhancing efficiency of protein language models with minimal wet-lab data through few-shot learning
发表时间
2024-07-02
期刊
Nature Communications, 2024,
Enhancing efficiency of protein language models with minimal wet-lab data through few-shot learning
发表时间
2024-07-02
期刊
Nature Communications, 2024
Protein Engineering with Lightweight Graph Denoising Neural Networks
发表时间
2024-04-17
期刊
Journal of Chemical Information and Modeling, 2024
Mn2+-induced structural flexibility enhances the entire catalytic cycle and the cleavage of mismatches in prokaryotic argonaute proteins
发表时间
2024-03-14
期刊
Chemical Science, 2024,
Direct Observation of the Mutual Coupling Effect in the Protein–Water–Glycerol Mixture by Combining Neutron Scattering and Selective Deuteration
发表时间
2024-01-06
期刊
The Journal of Physical Chemistry B, 2024,
ScaffoldGVAE: scaffold generation and hopping of drug molecules via a variational autoencoder based on multi-view graph neural networks
发表时间
2023-10-04
期刊
Journal of Cheminformatics, 2023,
LS-MolGen: Ligand-and-Structure Dual-Driven Deep Reinforcement Learning for Target-Specific Molecular Generation Improves Binding Affinity and Novelty
发表时间
2023-06-21
期刊
J. Chem. Inf. Model, 2023,
Observation of structural switch in nascent SAM-VI riboswitch during transcription at single-nucleotide and single-molecule resolution
发表时间
2023-04-22
期刊
Nature Communications, 2023,
The evolution of anionic nanoclusters at the electrode interface in water-in-salt electrolytes
发表时间
2023-03-17
期刊
Phys. Chem. Chem. Phys., 2023,
Creatinase: Using Increased Entropy to Improve the Activity and Thermostability
发表时间
2023-03-16
期刊
The Journal of Physical Chemistry B, 2023,
SESNet: sequence-structure feature-integrated deep learning method for data-efficient protein engineering
发表时间
2023-02-03
期刊
Journal of Cheminformatics, 2023,
SAM-DTA: a sequence-agnostic model for drug–target binding affinity prediction
发表时间
2022-12-21
期刊
Briefings in bioinformatics, 2023
Proteome-wide 3D structure prediction provides insights into the ancestral metabolism of ancient archaea and bacteria
发表时间
2022-12-21
期刊
Nature Communications, 2022,
Entropy Driving the Mg2+-Induced Folding of TPP Riboswitch RNA
发表时间
2022-11-15
期刊
The Journal of Physical Chemistry B, 2022,
Conduction Mechanism in Graphene Oxide Membranes with Varied Water Content: From Proton Hopping Dominant to Ion Diffusion Dominant
发表时间
2022-08-22
期刊
ACS Nano, 2022,
Non-ergodicity of a globular protein extending beyond its functional timescale
发表时间
2022-08-04
期刊
Chem. Sci. 13, 9668–9677 (2022)
Loosely-packed dynamical structures with partially-melted surface being the key for thermophilic argonaute proteins achieving high DNA-cleavage activity
发表时间
2022-07-22
期刊
Nucleic Acids Research, 2022,
The ω3 scaling of the vibrational density of states in quasi-2D nanoconfined solidsNature
发表时间
2022-06-25
期刊
Nature Communications, 2022
Many-body effect renders universal subdiffusion to water on different proteins
发表时间
2022-04-05
期刊
Physical Review Research, 2022,
Universal dynamical onset in water at distinct material interfaces
发表时间
2022-03-28
期刊
Chemical Science, 2022,
Enhancement of thermal stability of proteinase K by biocompatible cholinium-based ionic liquids
发表时间
2022-03-03
期刊
Physical Chemistry Chemical Physics, 2022,
